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Sub-publications- Hazzi, N.A. & Hormiga, G. 2023. Molecular phylogeny of the tropical wandering spiders (Araneae, Ctenidae) and the evolution of eye conformation in the RTA clade. Cladistics 39: 18-42
- Heikkilä, M., Mutanen, M., Kekkonen, M. & Kaila, L. 2014. Morphology reinforces proposed molecular phylogenetic affinities: a revised classification for Gelechioidea (Lepidoptera). Cladistics 30: 563–589
- Heraty, J.M.; Burks, R.A.; Cruaud, A.; Gibson, G.A.P.; Liljebad, J.; Munro, J.; Rasplus, J.-Y.; Delvare, G.; Jansta, P.; Gumovsky, A.; Huber, J.; Woolley, J.B.; Krogmann, L. et al 2013. A phylogenetic analysis of the megadiverse Chalcidoidea (Hymenoptera). Cladistics 29: 466-542
- Hermes, M.G., Melo, G.A.R. & Carpenter, J.M. 2013. The higher-level phylogenetic relationships of the Eumeninae (Insecta, Hymenoptera, Vespidae), with emphasis on Eumenes sensu lato. Cladistics 30: 453–484
- Hu, G., Brown, J., Heikkilä, M., Aarvik, L. & Mutanen, M. 2023. Molecular phylogeny, divergence time, biogeography and trends in host plant usage in the agriculturally important tortricid tribe Grapholitini (Lepidoptera: Tortricidae: Olethreutinae). Cladistics 39(5): 359–381
- Jamieson, B.G.M. 1988. On the phylogeny and higher classification of the Oligochaeta. Cladistics 4: 367-410
- Jamieson, B.G.M., Erséus, C. & Ferraguti, M. 1987. Parsimony analysis of the phylogeny of some oligochaeta annelida using spermatozoal ultrastructure. Cladistics 3(2): 145-155
- Kaila, L. 2004. Phylogeny of the superfamily Gelechioidea (Lepidoptera: Ditrysia): an exemplar approach. Cladistics
- Kaila, L. 2004. Phylogeny of the superfamily Gelechioidea (Lepidoptera: Ditrysia): an exemplar approach. Cladistics 20(4): 303-340
- Kelly, C.M.R., Barker, N.P., Villet, M.H. & Broadley, D.G. 2009. Phylogeny, biogeography and classification of the snake superfamily Elapoidea: a rapid radiation in the late Eocene. Cladistics 25(1): 38-63
- Ksepka, D.T., Bertelli, S. & Giannini, N.P. 2006. The phylogeny of the living and fossil Sphenisciformes (penguins). Cladistics 22: 412-441
- Kuntner, M., Coddington J.A. & Hormiga, G. 2008. Phylogeny of extant nephilid orb-weaving spiders (Araneae, Nephilidae): testing morphological and ethological homologies. Cladistics 24: 147-217
- Kvist, S. & Siddall, M.E. 2013. Phylogenomics of Annelida revisited: a cladistic approach using genome-wide expressed sequence tag data mining and examining the effects of missing data. Cladistics 29: 435–448
- Li, X., Teasdale, L.C., Bayless, K.M., Ellis, A.G., Wiegmann, B.M., Lamas, J.E., Lambkin, C.L., Evenhuis, N.L., Nicholls, J.A., Hartley, D., Shin, S., Trautwein, M., Zwick, A., Lessard, B.D., & Yeates, D.K. 2021. Phylogenomics reveals accelerated late Cretaceous diversification of bee flies (Diptera: Bombyliidae). Cladistics 37: 276-297
- Menard, K.L., Schuh, R.T. & Woolley, J.B. 2014. Total-evidence phylogenetic analysis and reclassification of the Phylinae (Insecta :Heteroptera : Miridae), with the recognition of new tribes and subtribes and a redefinition of Phylini. Cladistics 30: 391–427
- Mengual, X., Ståhls, G. & Rojo, S. 2008. First phylogeny of predatory flower flies (Diptera, Syrphidae, Syrphinae) using mitochondrial COI and nuclear 28S rRNA genes: conflict and congruence with the current tribal classification. Cladistics 24(4): 543–562
- Mengual, X., Ståhls, G. & Rojo, S. 2015. Phylogenetic relationships and taxonomic ranking of pipizine flower flies (Diptera: Syrphidae) with implications for the evolution of aphidophagy. Cladistics 31(5): 491–508
- Muona, J. 1996. The phylogeny of Elateroidea (Coleoptera), or which tree is best today? Cladistics 11(4): 317-341 [Date published Nov. 10, 1996]
- Pleijel, F. 1995. On character coding for phylogeny reconstruction. Cladistics 11: 309-315
- Pleijel, F. & Dahlgren, T. 1998. Position and delineation of Chrysopetalidae and Hesionidae (Annelida, Polychaeta, Phyllodocida). Cladistics 14: 129-150
- Prendini, L. 2000. Phylogeny and classification of the superfamily Scorpionoidea Latreille, 1802 (Chelicerata, Scorpiones): an exemplar approach. Cladistics 16: 1-78
- Rosell, D. & Uriz, M.J. 1997. Phylogenetic relationships within the excavating Hadromerida (Porifera), with a systematic revision. Cladistics 13: 349-366
- Sands, C.J., McInnes, S.J., Marley, N.J.. Goodall-Copestake, W.P., Convey, P. & Linse, K. 2008. Phylum Tardigrada: an "individual" approach. Cladistics 24(6): 861-871
- Schram, F.R. & Ellis, W.N. 1994. Metazoan relationships — a rebuttal. Cladistics 10: 331-337
- Schuh, R.T. 1991. Phylogenetic, host and biogeographic analyses of the Pilophorini (Heteroptera: Miridae: Phylinae). Cladistics 7: 157-189
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